Instructions: Enter a protein family record in PRODOM format. You can do this in many ways:

1) Type (or paste) your entry in the box labeled PRODOM ENTRY below.
2) Use the example given by clicking on the USE EXAMPLE button.
3) Type a PRODOM number (e.g. PD001000) in box labeled DBGet ID.
    When doing this, leave the PRODOM ENTRY box blank.
    NOTE: Method # 3 above requires the CURL library by Daniel Stenberg.

You can also use the CLEAR button to blank out the PRODOM ENTRY box. When finished, click on the SUBMIT button. The script will extract individual data elements from your input.

PRODOM ENTRY:

             DBGet ID:   example: IPB002128C

Sample Input:

ID 20167 p2002.1 10 seq. AC PD266930 KW FADR(2) Y586(1) // COMPLETE PROTEOME DNA-BINDING FATTY TRANSCRIPTION REGULATION METABOLISM REGULATOR ACID ACTIVATOR LA 74 ND 10 CC -!- DIAMETER: 119 PAM CC -!- RADIUS OF GYRATION: 53 PAM CC -!- SEQUENCE CLOSEST TO CONSENSUS: Q8ZEL9_YERPE 5-78 (distance:15 PAM) DC This family was generated by psi-blast, with a profile built from the seed aligment of the following SCOP FAMILY DC a.4.5.6 AL P09371|FADR_ECOLI 4 77 0.22 AQSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVTRTTLREVLQRLARDGWLTIQHGKPTKVNNFWETS AL Q8ZP15|Q8ZP15_SALTY 5 78 0.22 AQSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVTRTTLREVLQRLARDGWLTIQHGKPTKVNNFWETS AL Q8ZEL9|Q8ZEL9_YERPE 5 78 0.22 AQSPAGFAEEYIIESIWNNRFPPGSILPAERELSELIGVTRTTLREVLQRLARDGWLTIQHGKPTKVNNFWETS AL Q8Z685|Q8Z685_SALTI 5 78 0.35 AQSPAGFAEEYIIESIWNNCFPPGTILPAERELSELIGVTRTTLREVLQRLARDGWLTIQHGKPTKVNNFWETS AL Q9KQU8|Q9KQU8_VIBCH 5 78 0.62 AKSPAGFAEKYIIESIWNGRFPPGSILPAERELSELIGVTRTTLREVLQRLARDGWLTIQHGKPTKVNQFMETS AL Q9CPJ0|Q9CPJ0_PASMU 10 83 0.77 AQSPAGLAEEYIVRSIWNNHFPPGSDLPAERELAEKIGVTRTTLREVLQRLARDGWLNIQHGKPTKVNNIWETS AL P44705|FADR_HAEIN 10 81 1.08 AQSPAALAEEYIVKSIWQDVFPAGSNLPSERDLADKIGVTRTTLREVLQRLARDGWLTIQHGKPTKVNNIWD.. AL O07792|Y586_MYCTU 17 77 2.08 .........EQIATDVLTGEMPPGEALPSERRLAELLGVSRPAVREALKRLSAAGLVEVRQGDVTTVRDF.... AL Q11159|Y494_MYCTU 27 77 2.21 ...........IADAILDGVFPPGSTLPPERDLAERLGVNRTSLRQGLARLQQMGLIEVRHG............ AL Q8XFI2|Q8XFI2_SALTY 59 109 2.23 ...........IIKLINDNIFPPGTFLPPERELAKQLGVSRASLREALIVLEISGWIVIQSG............ CO AQSPAGFAEEYIVKSIWDGVFPPGSTLPPERELAERLGVSRTSLREALQRLERDGWIEIQHGKPTKVNNFWETS DR INTERPRO; IPR000524 "Bacterial regulatory proteins, GntR" DR PfamA; PF00392 gntR DR PROSITE; PS00043 PDOC00042 HTH_GNTR_FAMILY (27-51) DR PDB; 1H9T chain B (5-78) Q8ZP15_SALTY (5-78),1HW1 chain A (5-78),1HW1 chain B (5-78) DR PDB; 1H9T chain A (5-78) Q8ZP15_SALTY (5-78) //

More Sample Inputs: Click on an entry no. to view contents. (Not yet operational.)